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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006204.1_60894_62152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60894 - 62152

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTATCTATACAT

Flanking Amino Acid:

TSVQETREEIDPFDVDSGKE

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

74.9

0.62

81.3

29.9

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

0.08

75.07

41.3

Associated Gene:

Gene:

TSR3

Ensembl Gene ID:

ENSAPLG00000016165

Chromosome:

PEDO01006204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016864

60519 - 64599

4081