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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006228.1_2515_2978_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2515 - 2978

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCAGGGCGA

5'SS Class:

weak_major

3'SS Sequence:

GCTGCATCCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TCACCCCAAATC

Flanking Amino Acid:

GDPRGGEGPGLGATLHPKAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.3

50.2

38.6

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

54.2

0.1

1.1

52.2

36.2

Minor 5ss

19.7

-3.5

24.8

38.3

Minor BPS

46.7

-0.2

57.3

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022645

Chromosome:

PEDO01006228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045558

2296 - 3557

1262