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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006229.1_316_1272_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

316 - 1272

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCCAGGAGG

5'SS Class:

weak_major

3'SS Sequence:

TGGACTCGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGGAC

U12 Branch Point Sequence:

GCGACCTGGACT

Flanking Amino Acid:

AGPRSTAANEDVLSGTLESL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.3

55.5

41.7

Major BPS

44.7

-0.3

1.3

40.4

Major PPT

43.8

-0.3

1.7

46.8

45.8

Minor 5ss

-3.7

3.5

29.7

Minor BPS

53.4

0.19

1.6

65.53

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028570

Chromosome:

PEDO01006229.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036727

3 - 1325

1323