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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006246.1_12777_13225_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12777 - 13225

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGACCC

5'SS Class:

major

3'SS Sequence:

CCAGGCAGCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAG

U12 Branch Point Sequence:

TCGCCCCCCAGG

Flanking Amino Acid:

PTTRLPAPPPPPRLPVALRI

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

63.4

41.4

Major BPS

39.5

-0.6

1.5

43.7

39.4

Major PPT

50.7

0.02

42.6

Minor 5ss

34.6

-1.8

3.1

43.6

36.5

Minor BPS

35.1

-1.3

2.2

37.38

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026937

Chromosome:

PEDO01006246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033489

10555 - 14073

3519