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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006246.1_4032_4126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4032 - 4126

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

TCTCACCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CCTGTCTCACCC

Flanking Amino Acid:

LNGDGRVDFDEFVMMLSSR*

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

64.1

41.7

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

72.6

0.51

0.8

65.9

29.7

Minor 5ss

35.2

-1.7

3.1

45.9

43.3

Minor BPS

45.5

-0.3

1.9

53.1

45.1

Associated Gene:

Gene:

CABP4

Ensembl Gene ID:

ENSAPLG00000026880

Chromosome:

PEDO01006246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033887

3784 - 6666

2883

ENSAPLT00000022012

3784 - 5794

2011