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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006246.1_4549_4640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4549 - 4640

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

GTCCCTGGCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGGCGCTGAGGC

Flanking Amino Acid:

IEISQHIKMRMGGRVDFEDF

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

50.4

40.9

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

62.3

0.28

56.5

38.7

Minor 5ss

32.5

-2

3.3

35.4

Minor BPS

35.9

-1

38.36

39.4

Associated Gene:

Gene:

CABP4

Ensembl Gene ID:

ENSAPLG00000026880

Chromosome:

PEDO01006246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022012

3784 - 5794

2011

ENSAPLT00000033887

3784 - 6666

2883