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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006246.1_4785_4913_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4785 - 4913

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGGGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

GGTCCCTGTGCC

Flanking Amino Acid:

ERELSPEELDELLDAFKEFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

60.1

0.25

35.6

Major PPT

53.8

0.09

1.2

48.9

43.9

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

36.2

-1.1

3.5

55.03

42.3

Associated Gene:

Gene:

CABP4

Ensembl Gene ID:

ENSAPLG00000026880

Chromosome:

PEDO01006246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022012

3784 - 5794

2011