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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006246.1_887_1296_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

887 - 1296

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACCGGGG

5'SS Class:

weak_major

3'SS Sequence:

GCGCCTGATGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

GCGCCCCGACCA

Flanking Amino Acid:

ARPSVAPLCLGTAAGTRPTP

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.4

49.8

43.9

Major BPS

0.27

1.3

53.3

44.2

Major PPT

45.6

-0.2

1.7

46.1

40.6

Minor 5ss

22.3

-3.2

4.3

28.8

43.7

Minor BPS

41.2

-0.6

1.9

47.32

42.1

Associated Gene:

Gene:

OSBP

Ensembl Gene ID:

ENSAPLG00000013496

Chromosome:

PEDO01006246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029722

19 - 1744

1726