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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006257.1_3342_3636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3342 - 3636

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTCCC

5'SS Class:

major

3'SS Sequence:

GTCTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTCTGCTCACTC

Flanking Amino Acid:

RWTNGTAFNNWFVVRGGGPC

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

62.4

42.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.3

0.57

68.5

42.1

Minor 5ss

-2.2

2.7

34.9

34.2

Minor BPS

46.6

-0.2

2.2

61.86

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021096

Chromosome:

PEDO01006257.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042162

981 - 4441

3461