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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006257.1_4737_5116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4737 - 5116

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGGGTGCTGACG

Flanking Amino Acid:

WVDNSSIDATMFGSLGSEEN

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

78.8

29.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

86.3

0.82

0.8

80.6

Minor 5ss

-1.9

2.7

39.4

38.9

Minor BPS

38.5

-1

2.3

42.94

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023748

Chromosome:

PEDO01006257.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044438

117 - 6915

6799