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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006257.1_5227_5643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5227 - 5643

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CTCCCATTCACC

Flanking Amino Acid:

LAVFRNTTDMDHLREIIRRD

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

69.5

0.44

0.9

62.2

38.3

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

48.3

-0.1

2.1

60.84

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023748

Chromosome:

PEDO01006257.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044438

117 - 6915

6799