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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006270.1_4386_4696_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4386 - 4696

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTACATTC

5'SS Class:

major

3'SS Sequence:

CCTGTCCCTAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

ATGTCCCCAAGG

Flanking Amino Acid:

HVPKATFLSPRPHPHPHGHV

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.4

45.8

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

54.2

0.1

1.7

61.1

35.3

Minor 5ss

34.1

-1.8

51.2

45.4

Minor BPS

45.6

-0.4

2.2

54.89

45.9

Associated Gene:

Gene:

STRN4

Ensembl Gene ID:

ENSAPLG00000021534

Chromosome:

PEDO01006270.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026234

21 - 4857

4837