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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006293.1_3983_4556_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3983 - 4556

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGATGTGT

5'SS Class:

major

3'SS Sequence:

AGGGAAACCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGAGAC

U12 Branch Point Sequence:

GCCAGGGAAACC

Flanking Amino Acid:

LEKAGFGCAWRPPKPGSPER

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.1

59.3

Major BPS

43.7

-0.4

33.8

31.5

Major PPT

40.6

-0.5

1.6

29.9

35.7

Minor 5ss

32.6

-2

3.3

38.3

46.7

Minor BPS

28.9

-1.6

2.6

34.59

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026587

Chromosome:

PEDO01006293.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033411

3872 - 6133

2262