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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_1672_1910_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1672 - 1910

Intron Length:
239

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAGCGG

5'SS Class:
major

3'SS Sequence:
GTTTGTCCTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
GCCTGCTGACAG

Flanking Amino Acid:
EGPHQQDKEPEPLLPELNLH

Intron Amino Acid Position:
262

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
57.6
46.8

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
80.5
0.69
0.9
74
36.8

Minor 5ss
29.5
-2.3
3.3
38.6
46.5

Minor BPS
38.5
-1
2.1
37.72
44.6

Associated Gene:

Gene:
ZNF513

Ensembl Gene ID:

Chromosome:
PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2662
2642

21 - 2662
2642