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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_4553_4734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4553 - 4734

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGGCCACTAAGT

Flanking Amino Acid:

VKKSGGSIRKMFRRRANGAL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

83.3

0.75

0.7

77.6

24.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

44.8

-0.3

2.2

64.53

Associated Gene:

Gene:

SNX17

Ensembl Gene ID:

ENSAPLG00000006053

Chromosome:

PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006312

3923 - 7303

3381