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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_4813_4969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4813 - 4969

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTGAC

U12 Branch Point Sequence:

TTCTCCCTTACA

Flanking Amino Acid:

LQWVTITSPQAIMLSICLQS

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

58.8

0.22

1.3

44.3

Major PPT

86.1

0.81

0.7

80.2

25.3

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

60.9

0.34

76.46

40.3

Associated Gene:

Gene:

SNX17

Ensembl Gene ID:

ENSAPLG00000006053

Chromosome:

PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006312

3923 - 7303

3381