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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_5093_5388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5093 - 5388

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TGTGTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

CCCTCTGGAAAC

Flanking Amino Acid:

RMRCWRVTSSVPMSNGPSGS

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

35.8

Major BPS

50.7

0.02

1.5

44.2

Major PPT

74.9

0.56

69.4

41.7

Minor 5ss

32.1

-2

3.3

47.2

42.3

Minor BPS

41.9

-0.6

2.1

47.41

42.5

Associated Gene:

Gene:

SNX17

Ensembl Gene ID:

ENSAPLG00000006053

Chromosome:

PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006312

3923 - 7303

3381