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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_5850_5967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5850 - 5967

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

AGCTGCTCAGCA

Flanking Amino Acid:

RVGLNLLYAQTVSDIEHGWI

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.8

78.5

28.9

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

81.4

0.71

0.8

31.7

Minor 5ss

29.5

-2.3

3.4

40.8

45.7

Minor BPS

44.6

-0.4

2.1

54.85

43.7

Associated Gene:

Gene:

SNX17

Ensembl Gene ID:

ENSAPLG00000006053

Chromosome:

PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006312

3923 - 7303

3381