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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006314.1_6038_6423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6038 - 6423

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

AGAAGCTGACTC

Flanking Amino Acid:

NSEFRIILRKSYWDSSYDDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

76.9

0.61

0.8

73.9

31.2

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

39.9

-0.7

1.9

44.17

37.2

Associated Gene:

Gene:

SNX17

Ensembl Gene ID:

ENSAPLG00000006053

Chromosome:

PEDO01006314.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006312

3923 - 7303

3381