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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006325.1_10335_10532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10335 - 10532

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGATC

5'SS Class:

major

3'SS Sequence:

TGATATTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGATAT

U12 Branch Point Sequence:

TGAGCTTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

68.5

39.6

Major BPS

64.1

0.35

1.3

45.5

Major PPT

78.6

0.64

69.6

45.4

Minor 5ss

-1.7

3.5

42.7

44.7

Minor BPS

0.33

1.7

73.3

43.6

Associated Gene:

Gene:

SPCS2

Ensembl Gene ID:

ENSAPLG00000006232

Chromosome:

PEDO01006325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006466

10105 - 14911

4807