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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006325.1_10335_12443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10335 - 12443

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGATC

5'SS Class:

major

3'SS Sequence:

CTTCCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GGGCAATTAACT

Flanking Amino Acid:

HLCKSCFSSRWKIDDKPVKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

68.5

39.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

83.1

0.74

0.7

76.9

Minor 5ss

-1.7

3.5

42.7

44.7

Minor BPS

49.4

0.04

1.8

66.01

43.4

Associated Gene:

Gene:

SPCS2

Ensembl Gene ID:

ENSAPLG00000006232

Chromosome:

PEDO01006325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041439

9123 - 14911

5789

ENSAPLT00000019180

9123 - 14911

5789