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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006325.1_12528_12800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12528 - 12800

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GATTCGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

ACAAAATCAACC

Flanking Amino Acid:

KNSLDDSAKKVLLEKYKYVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

75.5

40.4

Major BPS

64.3

0.36

71.3

30.3

Major PPT

70.1

0.45

0.9

40.5

Minor 5ss

35.8

-1.6

3.2

51.3

45.1

Minor BPS

42.9

-0.5

1.9

49.6

39.6

Associated Gene:

Gene:

SPCS2

Ensembl Gene ID:

ENSAPLG00000006232

Chromosome:

PEDO01006325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041439

9123 - 14911

5789

ENSAPLT00000019180

9123 - 14911

5789

ENSAPLT00000006466

10105 - 14911

4807