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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006349.1_1435_1615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1435 - 1615

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

GCGGGGCTAACG

Flanking Amino Acid:

MASKLKERRRTPVSHKVIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

54.1

45.2

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

88.6

0.87

0.7

83.9

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

34.7

-1.3

2.5

35.87

45.6

Associated Gene:

Gene:

HELT

Ensembl Gene ID:

ENSAPLG00000029435

Chromosome:

PEDO01006349.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031537

1408 - 2571

1164