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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006365.1_499_2620_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

499 - 2620

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGCAGGG

5'SS Class:

major

3'SS Sequence:

TGCAGGGATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GCTGCAGGGATC

Flanking Amino Acid:

EGMGGSGGRWR*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.2

47.7

43.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

47.2

-0.1

1.2

37.3

43.6

Minor 5ss

28.5

-2.5

3.5

46.9

Minor BPS

36.5

-1

2.2

43.67

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027318

Chromosome:

PEDO01006365.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021590

495 - 2766

2272