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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006393.1_161_1022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161 - 1022

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TCTTCTGTGACA

Flanking Amino Acid:

GAEAAKNALNGIRFDPENPQ

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

75.2

0.57

71.7

38.2

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

59.3

0.29

73.66

38.8

Associated Gene:

Gene:

RBPMS2

Ensembl Gene ID:

ENSAPLG00000004799

Chromosome:

PEDO01006393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027785

21 - 13970

13950

ENSAPLT00000004951

5 - 7398

7394