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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006393.1_1662_2555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1662 - 2555

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

GGAACCTGACAC

Flanking Amino Acid:

ELYLLFRPFKGYEGSLIKLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

60.1

0.25

35.6

Major PPT

83.4

0.75

0.7

77.1

31.6

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

43.6

-0.5

1.8

48.55

Associated Gene:

Gene:

RBPMS2

Ensembl Gene ID:

ENSAPLG00000004799

Chromosome:

PEDO01006393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027785

21 - 13970

13950