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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006398.1_15627_16670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15627 - 16670

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTCCTCACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTCCTCACTA

Flanking Amino Acid:

MMTPLEAVKKQQKYTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

70.6

0.46

0.9

64.3

37.5

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

0.31

1.8

72.89

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024544

Chromosome:

PEDO01006398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022971

15473 - 20194

4722