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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006398.1_16462_18143_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16462 - 18143

Intron Length:

1682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAATCCGT

5'SS Class:

major

3'SS Sequence:

AAATGTGAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTGTCAGAAAC

Flanking Amino Acid:

LPDLKSMSSPASENG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

58.5

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

51.1

0.03

1.1

44.3

Minor 5ss

42.1

-0.9

3.2

61.3

43.3

Minor BPS

47.7

-0.1

1.9

65.27

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029279

Chromosome:

PEDO01006398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034877

15821 - 18159

2339