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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006398.1_2125_2387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2125 - 2387

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATATTTTAAAT

Flanking Amino Acid:

RWKSGWEENKNSQQSEEHQA

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.9

0.81

0.8

83.8

31.2

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

65.7

0.57

1.4

78.88

36.8

Associated Gene:

Gene:

PCF11

Ensembl Gene ID:

ENSAPLG00000012231

Chromosome:

PEDO01006398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012748

616 - 11935

11320