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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006398.1_8640_9088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8640 - 9088

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

AACTTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

TATGAATGAAAA

Flanking Amino Acid:

THRRWYYSLTDWIEFEEIAD

Intron Amino Acid Position:

1307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

71.9

0.49

0.8

70.2

35.4

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

43.9

-0.4

57.63

40.6

Associated Gene:

Gene:

PCF11

Ensembl Gene ID:

ENSAPLG00000012231

Chromosome:

PEDO01006398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012748

616 - 11935

11320