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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006398.1_9245_10259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9245 - 10259

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTTTC

5'SS Class:

major

3'SS Sequence:

AATACCTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTCAATACCT

Flanking Amino Acid:

VPAGPAGAVESCEICQEQFE

Intron Amino Acid Position:

1359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.57

0.9

70.4

40.1

Minor 5ss

45.1

-0.5

3.1

60.9

38.3

Minor BPS

52.7

0.16

2.1

80.93

40.2

Associated Gene:

Gene:

PCF11

Ensembl Gene ID:

ENSAPLG00000012231

Chromosome:

PEDO01006398.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012748

616 - 11935

11320