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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006409.1_665_1296_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

665 - 1296

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACCCGGG

5'SS Class:

major

3'SS Sequence:

GTGGGTGCGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGGCAT

U12 Branch Point Sequence:

TACACCTTCAGC

Flanking Amino Acid:

SSYSMGWMRQAPGKGLEWVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.49

1.3

54.9

46.6

Major BPS

51.1

0.03

1.5

63.1

44.4

Major PPT

52.8

0.06

1.2

45.8

45.9

Minor 5ss

29.9

-2.3

4.4

46.9

48.5

Minor BPS

48.5

-0.1

2.1

59.95

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025091

Chromosome:

PEDO01006409.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039911

105 - 1680

1576