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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_10250_10533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10250 - 10533

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTGTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTGCTCTCACAT

Flanking Amino Acid:

TELPALFEIAPSVPRDGTSS

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

60.6

38.8

Major BPS

72.7

0.56

30.1

Major PPT

79.5

0.66

0.8

31.9

Minor 5ss

30.4

-2.2

3.1

40.5

38.7

Minor BPS

43.9

-0.3

1.9

58.25

44.6

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132

ENSAPLT00000039056

8886 - 14722

5837