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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_10630_10730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10630 - 10730

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCACA

5'SS Class:

major

3'SS Sequence:

GTTCACCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CCTCCCTGAGCC

Flanking Amino Acid:

PPYEKVVLKEANFKRPVVIL

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

67.6

39.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

69.8

0.45

0.9

61.8

34.6

Minor 5ss

32.8

-2

3.1

40.2

45.7

Minor BPS

50.3

-0

1.8

60.78

44.2

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132