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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_10928_11198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10928 - 11198

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GAATTCTGAGCC

Flanking Amino Acid:

QDKGIIPNQSRAEQIASLES

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

81.5

0.71

0.7

73.4

31.5

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

49.4

-0

1.7

58.38

39.7

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132

ENSAPLT00000039056

8886 - 14722

5837