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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_11986_12208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11986 - 12208

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCAGT

5'SS Class:

major

3'SS Sequence:

TTCTCCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CGTTTCTCCACG

Flanking Amino Acid:

GIQEGDQILQANDTSFQNLT

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.3

63.8

47.8

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

70.5

0.46

66.7

34.1

Minor 5ss

45.6

-0.5

43.7

Minor BPS

47.6

-0.3

2.1

55.64

45.7

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132