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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_12465_13019_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12465 - 13019

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGCCCT

5'SS Class:

major

3'SS Sequence:

AAGGGCTGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

TGCGTCTGCAGG

Flanking Amino Acid:

LPAAARMNSPPWELRQGRVR

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.4

57.5

47.1

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

48.4

-0

1.2

39.4

43.9

Minor 5ss

42.4

-0.8

3.1

62.7

41.6

Minor BPS

38.1

-1

2.1

39.64

44.3

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837