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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_12581_12687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12581 - 12687

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTGAG

5'SS Class:

major

3'SS Sequence:

TCCTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGGAC

U12 Branch Point Sequence:

ACCTCCTGGACG

Flanking Amino Acid:

NTNTHDALGHDVLEAVEGDG

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

61.1

39.6

Major BPS

44.7

-0.3

1.3

40.4

Major PPT

82.7

0.74

0.7

77.1

24.9

Minor 5ss

25.3

-2.8

3.2

26.8

38.4

Minor BPS

56.5

0.06

1.6

57.45

44.2

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132