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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_13363_13997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13363 - 13997

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGT

5'SS Class:

major

3'SS Sequence:

TCTGCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

GTGCACTGAGGC

Flanking Amino Acid:

SLQEGDLILKINGVASEDMS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

64.1

42.1

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

76.2

0.59

0.8

66.3

35.8

Minor 5ss

24.4

-2.9

3.6

37.8

Minor BPS

39.9

-0.7

1.9

46.89

41.5

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132

ENSAPLT00000040988

8619 - 14750

6132