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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_14102_14334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14102 - 14334

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCCT

5'SS Class:

major

3'SS Sequence:

CTCTGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

AGCGCTGTCACG

Flanking Amino Acid:

SVLVKKKESEEYGLKLGSQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

44.2

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

0.56

0.9

68.6

37.3

Minor 5ss

-2.1

3.6

47.9

47.8

Minor BPS

39.1

-1

2.3

41.31

43.8

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837

ENSAPLT00000004583

8619 - 14750

6132