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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_14494_14538_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14494 - 14538

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCAGGACA

5'SS Class:

major

3'SS Sequence:

GACAGCGGCTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTGGAG

U12 Branch Point Sequence:

AGAGCCCCGACA

Flanking Amino Acid:

HSRGYDGDSRNRRGYSRRRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.2

70.4

33.3

Major BPS

40.6

-0.5

1.6

36.8

42.3

Major PPT

49.2

-0

1.1

42.2

42.8

Minor 5ss

19.4

-3.5

3.5

24.2

Minor BPS

43.6

-0.5

1.9

51.62

39.4

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837

ENSAPLT00000028371

8886 - 14722

5837