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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_3310_3745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3310 - 3745

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCAATATCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

CCTGCTTTATCC

Flanking Amino Acid:

SPSSCPAFKDVPGPCDPEDL

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

65.6

0.35

0.9

61.3

38.4

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

53.3

0.08

1.8

61.09

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032887

1530 - 7423

5894

ENSAPLT00000004353

1530 - 7495

5966