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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_3892_4004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3892 - 4004

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GGGCACTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GGGACCTCACTG

Flanking Amino Acid:

QAQEAVDRIKAPEGESQPMT

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

63.6

0.34

65.3

32.1

Major PPT

66.5

0.37

57.9

42.8

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

43.2

-0.6

1.8

41.97

42.8

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032887

1530 - 7423

5894

ENSAPLT00000004353

1530 - 7495

5966