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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_4784_5118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4784 - 5118

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

TCTCTATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

CCCTCTCTATCC

Flanking Amino Acid:

MICHVFHSADAQIIAQAIGQ

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

70.5

35.4

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

77.7

0.62

0.8

69.7

35.6

Minor 5ss

-2.4

3.1

35.6

41.4

Minor BPS

46.4

-0.2

1.9

53.94

44.5

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032887

1530 - 7423

5894

ENSAPLT00000004353

1530 - 7495

5966