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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_5299_5526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5299 - 5526

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

TCCACCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAC

U12 Branch Point Sequence:

GTGCCCACCACC

Flanking Amino Acid:

HFSRQENCKDVCIRKQKGEI

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

72.5

37.3

Major BPS

52.2

0.06

1.4

64.2

Major PPT

68.4

0.41

0.8

60.9

29.2

Minor 5ss

34.5

-1.8

3.5

48.1

Minor BPS

42.7

-0.5

2.1

54.22

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004353

1530 - 7495

5966

ENSAPLT00000032887

1530 - 7423

5894