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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_5740_6219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5740 - 6219

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

TCCCATCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GCTTTCTGAAGT

Flanking Amino Acid:

PLTTCQSIIRELKHQTEVTL

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

53.2

45.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

77.9

0.63

0.8

68.7

36.9

Minor 5ss

32.3

-2

2.9

31.8

42.1

Minor BPS

0.3

1.8

72.98

43.9

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032887

1530 - 7423

5894

ENSAPLT00000004353

1530 - 7495

5966