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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_6340_7144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6340 - 7144

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CGGCTCTGATCT

Flanking Amino Acid:

QLGFCVENGVICSLMRGGIA

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

0.72

38.9

Major PPT

0.45

0.8

60.7

35.3

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

46.2

-0.2

1.7

58.58

44.3

Associated Gene:

Gene:

APBA3

Ensembl Gene ID:

ENSAPLG00000004226

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004353

1530 - 7495

5966

ENSAPLT00000032887

1530 - 7423

5894