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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_9013_9353_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9013 - 9353

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGGGCT

5'SS Class:

weak_major

3'SS Sequence:

ATCTCTGGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGACCAT

U12 Branch Point Sequence:

TGGTCCTGCACG

Flanking Amino Acid:

LSEQVGTPNLQHHRSPLSPR

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

67.1

35.4

Major BPS

50.4

0.01

1.4

60.8

45.4

Major PPT

47.6

-0.1

1.7

52.7

41.1

Minor 5ss

22.3

-3.2

4.5

43.3

45.1

Minor BPS

51.6

-0.1

61.1

46.2

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039056

8886 - 14722

5837