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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_9099_9409_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9099 - 9409

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCACAGATG

5'SS Class:

major

3'SS Sequence:

GGCAGCACAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACAGAG

U12 Branch Point Sequence:

AGAGCAGCACCC

Flanking Amino Acid:

QPALARSSEPHQVPHTPGGG

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.3

60.1

44.6

Major BPS

-0.6

1.4

32.4

34.9

Major PPT

49.8

-0

38.1

Minor 5ss

24.3

-3

4.2

46.6

Minor BPS

32.9

-1.3

2.2

39.85

38.9

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028371

8886 - 14722

5837