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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006418.1_9143_9373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9143 - 9373

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

TCTTTTTACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTCTTTTTACA

Flanking Amino Acid:

MYPSHGLSEQATEQHPQGQW

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

83.4

0.75

0.8

79.9

31.1

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

57.4

0.22

1.6

67.8

38.6

Associated Gene:

Gene:

TJP3

Ensembl Gene ID:

ENSAPLG00000004428

Chromosome:

PEDO01006418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040988

8619 - 14750

6132

ENSAPLT00000004583

8619 - 14750

6132